This week's forecast: Sunny with a 40 percent chance of flu
New computer model takes a page from weather forecasting to
predict regional peaks in influenza outbreaks
NEW YORK (November 26,
2012)—Scientists have developed a system to predict the timing and severity of
seasonal influenza outbreaks that could one day help health officials and the
general public better prepare for them. The system adapts techniques used in
modern weather prediction to turn real-time, Web-based estimates of influenza
infection into local forecasts of seasonal flu.
Results appear online
in the Proceedings of the National Academy of Sciences.
Year to year, and
region to region, there is huge variability in the peak of flu season, which,
in temperate areas of the Northern Hemisphere, can happen as early as October
or as late as April. The forecast system can provide "a window into what
can happen week to week as flu prevalence rises and falls," says Jeffrey
Shaman, PhD, an assistant professor of Environmental Health Sciences at Columbia University's Mailman School of Public
Health.
As a test case, Dr.
Shaman and Alicia Karspeck, PhD, of the National Center for Atmospheric
Research, used Web-based estimates of flu-related sickness from the 2003-2008
influenza seasons in New York City to retrospectively generate weekly flu
forecasts and found that the technique could predict the peak timing of the
outbreak more than seven weeks in advance of the actual peak.
In the future, such flu
forecasts might conceivably be disseminated on the local television news along
with the weather report, says Dr. Shaman. Like the weather, flu conditions vary
from region to region; Atlanta might peak weeks ahead of Anchorage.
"Because we are all familiar with weather broadcasts, when we hear that
there is a 80% chance of rain, we all have an intuitive sense of whether or not
we should carry an umbrella," says Dr. Shaman. "I expect we will
develop a similar comfort level and confidence in flu forecasts and develop an
intuition of what we should do to protect ourselves in response to different
forecast outcomes."
As individuals, a flu forecast could prompt us to get a vaccine, exercise care around people sneezing
and coughing, and better tune in to how we feel. For health officials, it could
inform decisions on how many vaccines and antiviral drugs to stockpile, and in
the case of a virulent outbreak, whether other measures, like closing schools,
is necessary. (or take HYFN's -Hydrated Fullerenes--WD]
"Flu forecasting has the potential to significantly improve our ability to prepare for and
manage the seasonal flu outbreaks that strike each year," says Irene
Eckstrand, PhD, of the National Institutes of Health's National Institute of
General Medical Sciences, which provided funding for the study.
Worldwide, influenza kills an estimated 250,000 to 500,000 people each year; in the U.S. about
35,000 die from the flu every year.
The seed of the new study was planted four years ago in a conversation between the two researchers,
in which Dr. Shaman expressed an interest in using models to forecast
influenza. Dr. Karspeck "recommended incorporating some of the data
assimilation techniques used in weather forecasting to build a skillful
prediction system" remembers Dr. Shaman.
In weather forecasting real-time observational data are used to "nudge the model to conform with
reality and reduce error in the model simulations," he explains. Applying
this method to flu forecasting, the researchers used near-real-time data from
Google Flu Trends, which estimates outbreaks based on the number of flu-related
search queries in a given region.
Going forward, Dr. Shaman will test the model in other localities across the country using
up-to-date data. This is necessary, he says, since "there is no guarantee
that just because the method works in New York
it will work in Miami."
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About Columbia University's Mailman School of Public Health
Founded in 1922 as one of the first three public health academies in the nation, Columbia University's
Mailman School of Public Health pursues an agenda of research, education, and
service to address the critical and complex public health issues affecting New
Yorkers, the nation and the world. The Mailman School
is the third largest recipient of NIH grants among schools of public health.
Its over 300 multi-disciplinary faculty members work in more than 100 countries
around the world, addressing such issues as preventing infectious and chronic
diseases, environmental health, maternal and child health, health policy,
climate change & health, and public health preparedness. It is a leader in
public health education with over 1,000 graduate students from more than 40
nations pursuing a variety of master's and doctoral degree programs. The Mailman School
is also home to numerous world-renowned research centers including the International Center
for AIDS Care and Treatment Programs (ICAP), the National Center
for Disaster Preparedness, and the Center for Infection and Immunity. For more
information, please visit www.mailman.columbia.edu
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